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Intron Name: Anas_platyrhynchos_platyrhynchos_2_62580955_62585851_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
62580955 - 62585851

Intron Length:
4897

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TCT|GTAAGTACT

5'SS Class:
major

3'SS Sequence:
CTTTCCTCCCAAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTGAT

U12 Branch Point Sequence:
TCAATCTCAAAA

Flanking Amino Acid:
NQEDFQSRPILELKEKNQPE

Intron Amino Acid Position:
54

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
76.8
0.63
1.1
77.8
36.6

Major BPS
96.4
1.15
0.6
85.7
34.9

Major PPT
69.5
0.44
1
67.9
32.5

Minor 5ss
41.3
-1
2.8
62.9
41

Minor BPS
49.1
-0
1.7
58.4
40.7

Associated Gene:

Gene:
ELMO1

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

62566907 - 62586015
19109

62558245 - 62587540
29296