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Intron Name: Anas_platyrhynchos_platyrhynchos_2_6287183_6287846_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6287183 - 6287846

Intron Length:

664

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAA|GTACCACAG

5'SS Class:

weak_major

3'SS Sequence:

CCTCCTCTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAC

U12 Branch Point Sequence:

GTTTCCCCAAGC

Flanking Amino Acid:

IIHEYLSYIQVPDTPQVG*

Intron Amino Acid Position:

609

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

55.2

0.12

1.2

47.3

43.1

Major BPS

61.3

0.28

30.6

Major PPT

82.1

0.72

0.7

76.1

25.9

Minor 5ss

37.5

-1.4

3.3

47.4

42.6

Minor BPS

49.4

-0

2.2

68.63

42.5

Associated Gene:

Gene:

NUB1

Ensembl Gene ID:

ENSAPLG00000013255

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013835

6275218 - 6287873

12656