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Intron Name: Anas_platyrhynchos_platyrhynchos_2_6291362_6292869_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
6291362 - 6292869

Intron Length:
1508

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACCAAAG

5'SS Class:
major

3'SS Sequence:
CCTGTTGTTGCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
GTTTGAC

U12 Branch Point Sequence:
TGCAGTTTGACG

Flanking Amino Acid:
GHKFIINCIQIHNELLYTAS

Intron Amino Acid Position:
327

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.1
0.43
1.2
62.7
43.6

Major BPS
68.7
0.47
1.2
63.1
44.5

Major PPT
78.1
0.63
0.9
72
38

Minor 5ss
37.3
-1.4
3.1
48.6
47.1

Minor BPS
47.1
-0.3
1.9
51.52
43.3

Associated Gene:

Gene:
WDR86

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

6291143 - 6308863
17721