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Intron Name: Anas_platyrhynchos_platyrhynchos_2_629565_630207_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

629565 - 630207

Intron Length:

643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGCCTT

5'SS Class:

strong_major

3'SS Sequence:

ATGCACCCTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGCAC

U12 Branch Point Sequence:

TCGTGCTGACCT

Flanking Amino Acid:

VGDFKEGLEHGFGICLVPRR

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

72.7

44.5

Major BPS

57.3

0.18

1.4

69.3

37.7

Major PPT

63.7

0.31

0.9

35.3

Minor 5ss

43.4

-0.7

3.2

57.4

46.8

Minor BPS

47.7

-0

2.2

68.2

48.4

Associated Gene:

Gene:

ALS2CL

Ensembl Gene ID:

ENSAPLG00000005280

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000038866

616350 - 640574

24225

ENSAPLT00000022344

616350 - 641213

24864

ENSAPLT00000005504

616350 - 658098

41749