Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_63038219_63040703_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63038219 - 63040703

Intron Length:

2485

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGAGCACT

5'SS Class:

strong_major

3'SS Sequence:

TCTTAATTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TATTTCTTAATT

Flanking Amino Acid:

VLIMCYEWRSRLMLLDGCLV

Intron Amino Acid Position:

451

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.8

80.5

33.9

Major BPS

0.92

0.9

86.2

29.1

Major PPT

84.4

0.77

0.8

81.4

34.9

Minor 5ss

36.6

-1.5

2.9

49.5

46.5

Minor BPS

85.1

1.18

0.9

92.77

28.9

Associated Gene:

Gene:

SFRP4

Ensembl Gene ID:

ENSAPLG00000006682

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046428

63035669 - 63044752

9084

ENSAPLT00000006924

63035669 - 63044752

9084