Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_63139841_63142889_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63139841 - 63142889

Intron Length:

3049

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAT|GTGAGTTGT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCCCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

CTGTTCTAAAGC

Flanking Amino Acid:

ITLLWIIELNVKGGIETTLE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.2

0.71

76.9

34.5

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

79.6

0.67

0.8

74.2

30.9

Minor 5ss

38.9

-1.2

53.8

43.7

Minor BPS

49.4

-0

60.8

45.1

Associated Gene:

Gene:

STARD3NL

Ensembl Gene ID:

ENSAPLG00000014212

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034284

63139544 - 63153026

13483

ENSAPLT00000014843

63139544 - 63153026

13483