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Intron Name: Anas_platyrhynchos_platyrhynchos_2_63146766_63149198_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

63146766 - 63149198

Intron Length:

2433

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGCTTT

5'SS Class:

weak_major

3'SS Sequence:

TTCTTCCTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTAAT

U12 Branch Point Sequence:

TATCTAATAACA

Flanking Amino Acid:

VLPQEAEEENRFLIAQDASE

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.9

0.54

1.1

72.9

39.3

Major BPS

85.7

0.89

0.8

22.2

Major PPT

86.3

0.82

0.6

85.3

22.1

Minor 5ss

0.24

2.7

79.2

35.5

Minor BPS

50.9

0.03

1.9

68.47

36.8

Associated Gene:

Gene:

STARD3NL

Ensembl Gene ID:

ENSAPLG00000014212

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000034284

63139544 - 63153026

13483

ENSAPLT00000014843

63139544 - 63153026

13483