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Intron Name: Anas_platyrhynchos_platyrhynchos_2_63151801_63152536_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
3UTR

Intron Coordinates:
63151801 - 63152536

Intron Length:
736

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTAAGTTCC

5'SS Class:
strong_major

3'SS Sequence:
TCATCTGTTACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TCTTAAT

U12 Branch Point Sequence:
TTAATCTTGATT

Flanking Amino Acid:
3UTR

Intron Amino Acid Position:
3UTR

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
95.8
1.08
0.7
84.9
25.9

Major BPS
87
0.92
0.9
86.2
29.1

Major PPT
78.1
0.63
0.9
71.9
37.9

Minor 5ss
41.5
-0.9
2.7
53.7
43.5

Minor BPS
68
0.65
1.2
79.99
35.9

Associated Gene:

Gene:
STARD3NL

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

63139544 - 63153026
13483

63139544 - 63153026
13483