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Intron Name: Anas_platyrhynchos_platyrhynchos_2_63155307_63155830_R


Intron Information:

Intron Rank:
18

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
63155307 - 63155830

Intron Length:
524

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTACTGTAG

5'SS Class:
major

3'SS Sequence:
TTCTGTATTTCAG|A

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTCTAC

U12 Branch Point Sequence:
TTTTCTGTATTT

Flanking Amino Acid:
IEEATLTLSQNEESDSVSPP

Intron Amino Acid Position:
700

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.3
0.46
1.1
59.6
41.8

Major BPS
63.9
0.35
1.3
64.5
42.5

Major PPT
83.8
0.76
0.8
81.4
35

Minor 5ss
35.1
-1.7
3.4
46.5
48.8

Minor BPS
56.4
0.28
2.2
83.14
39

Associated Gene:

Gene:
MLH1

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

63154986 - 63170820
15835