Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_63188395_63189765_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63188395 - 63189765

Intron Length:

1371

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGTTAC

5'SS Class:

strong_major

3'SS Sequence:

ATCATTTTTGCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

ATGTTTCTAATG

Flanking Amino Acid:

LNAEVEVVEMFENDISAFTY

Intron Amino Acid Position:

791

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

72.8

32.5

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

82.4

0.73

0.8

76.8

36.6

Minor 5ss

46.7

-0.3

2.5

57.4

41.8

Minor BPS

51.1

-0.1

1.7

57.44

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015132

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000015887

63176377 - 63239146

62770

ENSAPLT00000045141

63176377 - 63240865

64489