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Intron Name: Anas_platyrhynchos_platyrhynchos_2_63189137_63189172_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
63189137 - 63189172

Intron Length:
36

Sequence Information:

Terminal Dinucleotides:
GC-AG

5'SS Sequence:
AAA|GCAGATTTA

5'SS Class:
major

3'SS Sequence:
TCACTTAAATTAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTAAG

U12 Branch Point Sequence:
AATCACTTAAAT

Flanking Amino Acid:
HDININNLEKKML

Intron Amino Acid Position:
4

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
66.4
0.39
1.2
63.9
40.3

Major BPS
75.6
0.64
1.5
84
34.5

Major PPT
60.6
0.24
1
60.7
39.1

Minor 5ss
33.1
-1.9
4.3
47.7
43

Minor BPS
61.6
0.44
1.6
76.36
38.9

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

63176377 - 63189183
12807