Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_63190766_63194464_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63190766 - 63194464

Intron Length:

3699

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TCCTTTCACACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

CTTCCTTTCACA

Flanking Amino Acid:

KCTETQKAEENVKALMGVEK

Intron Amino Acid Position:

625

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.8

0.94

0.8

26.2

Major BPS

78.6

0.71

79.6

32.9

Major PPT

76.6

0.6

0.8

72.2

31.5

Minor 5ss

41.1

-1

2.5

50.4

46.1

Minor BPS

61.3

0.35

1.8

72.26

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015132

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045141

63176377 - 63240865

64489

ENSAPLT00000015887

63176377 - 63239146

62770