Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_63226431_63227203_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63226431 - 63227203

Intron Length:

773

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGATAA

5'SS Class:

major

3'SS Sequence:

TCATTATCCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

ATTTCATTATCC

Flanking Amino Acid:

FIIVFMCCACTMLTAISMSA

Intron Amino Acid Position:

125

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.1

66.9

34.8

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

75.1

0.56

0.9

69.2

35.8

Minor 5ss

39.2

-1.2

3.1

48.1

47.5

Minor BPS

64.7

0.44

1.9

78.35

36.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000015132

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045141

63176377 - 63240865

64489

ENSAPLT00000015887

63176377 - 63239146

62770