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Intron Name: Anas_platyrhynchos_platyrhynchos_2_6327671_6333532_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

6327671 - 6333532

Intron Length:

5862

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

TTG|GCTGAGAGC

5'SS Class:

weak_major

3'SS Sequence:

AGTGCTGGTGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GACAGAA

U12 Branch Point Sequence:

GGGACAGAAACA

Flanking Amino Acid:

VGMVSDHLQLAFGAMLGTRD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

51.5

0.04

1.3

53.6

40.2

Major BPS

45.8

-0.2

1.1

38.7

32.4

Major PPT

61.7

0.26

1.1

54.2

45.2

Minor 5ss

16.7

-3.8

3.7

22.3

31.2

Minor BPS

38.3

-0.8

2.3

46.83

42.3

Associated Gene:

Gene:

CRYGN

Ensembl Gene ID:

ENSAPLG00000013788

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014357

6324839 - 6334252

9414