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Intron Name: Anas_platyrhynchos_platyrhynchos_2_63863035_63863985_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
63863035 - 63863985

Intron Length:
951

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGA|GTGAGTGGG

5'SS Class:
major

3'SS Sequence:
TGTTTGATCATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
CTTTCAT

U12 Branch Point Sequence:
ATTTGAATAACT

Flanking Amino Acid:
HLDIIWINTPEKTVPYGLGG

Intron Amino Acid Position:
69

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
69.1
0.45
1.1
56.9
42.6

Major BPS
87.6
0.93
0.9
89.3
26

Major PPT
71.6
0.49
0.9
65.9
39.7

Minor 5ss
27.9
-2.5
3
27.6
37.5

Minor BPS
51.6
0.13
2.3
80.93
40.2

Associated Gene:

Gene:
EDN1

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

63859859 - 63864507
4649