Gene Search

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63913209 - 63915146

Intron Length:

1938

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGAGGTT

5'SS Class:

major

3'SS Sequence:

CTTTTTTCCTAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAT

U12 Branch Point Sequence:

GAGTATTTCATT

Flanking Amino Acid:

NYCNFSFKTKGNLTKHMKSK

Intron Amino Acid Position:

2093

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.8

0.54

1.1

70.2

40.4

Major BPS

91.2

1.02

0.7

91.7

20.2

Major PPT

77.3

0.61

0.9

82.9

Minor 5ss

33.1

-1.9

4.1

54.5

49.7

Minor BPS

47.2

-0.1

1.9

62.46

Associated Gene:

Gene:

HIVEP1

Ensembl Gene ID:

ENSAPLG00000012713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013234

63896637 - 63930407

33771

ENSAPLT00000029632

63896637 - 64010475

113839

ENSAPLT00000036410

63896637 - 64009033

112397

ENSAPLT00000028877

63896637 - 63981621

84985

ENSAPLT00000033170

63896637 - 64009033

112397

ENSAPLT00000026926

63896637 - 63945799

49163

ENSAPLT00000031370

63896637 - 64009033

112397

ENSAPLT00000023561

63897425 - 63975174

77750

ENSAPLT00000029698

63896637 - 64010475

113839

ENSAPLT00000045302

63898686 - 63975174

76489

Intron Name: Anas_platyrhynchos_platyrhynchos_2_63913209_63915146_R

Intron Information:

Sequence Information:

Site Scores:

Associated Gene:

Associated Transcripts: