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Intron Name: Anas_platyrhynchos_platyrhynchos_2_63929212_63945745_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

63929212 - 63945745

Intron Length:

16534

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATAAGC

5'SS Class:

strong_major

3'SS Sequence:

TGTGTTTTAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TGTGTTTTAACA

Flanking Amino Acid:

QLNGTEDQQREITDASTRGN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

71.8

38.2

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

77.6

0.62

73.3

40.9

Minor 5ss

33.9

-1.8

2.9

44.3

Minor BPS

69.8

0.62

1.3

75.16

36.6

Associated Gene:

Gene:

HIVEP1

Ensembl Gene ID:

ENSAPLG00000012713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023561

63897425 - 63975174

77750

ENSAPLT00000031370

63896637 - 64009033

112397

ENSAPLT00000029698

63896637 - 64010475

113839

ENSAPLT00000029632

63896637 - 64010475

113839

ENSAPLT00000045302

63898686 - 63975174

76489

ENSAPLT00000028877

63896637 - 63981621

84985

ENSAPLT00000033170

63896637 - 64009033

112397