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Intron Name: Anas_platyrhynchos_platyrhynchos_2_63972884_63975020_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

63972884 - 63975020

Intron Length:

2137

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTGT

5'SS Class:

strong_major

3'SS Sequence:

CTTCCCCGAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTCTGAT

U12 Branch Point Sequence:

GCCTCCTGACAT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.87

0.9

81.2

33.8

Major BPS

0.72

38.9

Major PPT

66.9

0.38

62.7

33.1

Minor 5ss

41.3

-1

58.7

45.8

Minor BPS

47.9

-0

1.9

62.72

46.8

Associated Gene:

Gene:

HIVEP1

Ensembl Gene ID:

ENSAPLG00000012713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045302

63898686 - 63975174

76489

ENSAPLT00000033170

63896637 - 64009033

112397

ENSAPLT00000023561

63897425 - 63975174

77750