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Intron Name: Anas_platyrhynchos_platyrhynchos_2_63975175_64008886_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

63975175 - 64008886

Intron Length:

33712

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTATGTAGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTTTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTCAT

U12 Branch Point Sequence:

TGAACTTTCATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

77.9

36.9

Major BPS

87.6

0.93

0.9

89.3

Major PPT

1.1

0.4

13.8

Minor 5ss

42.2

-0.9

2.5

54.4

42.8

Minor BPS

52.8

0.17

1.8

70.12

41.1

Associated Gene:

Gene:

HIVEP1

Ensembl Gene ID:

ENSAPLG00000012713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000033170

63896637 - 64009033

112397

ENSAPLT00000029632

63896637 - 64010475

113839