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Intron Name: Anas_platyrhynchos_platyrhynchos_2_64009034_64009900_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

64009034 - 64009900

Intron Length:

867

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGT|GTAAGTAGT

5'SS Class:

major

3'SS Sequence:

TTTTTTTTTTTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

CATCTCCTAACT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.7

0.61

1.1

74.7

41.5

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

95.8

1.03

0.5

96.6

11.7

Minor 5ss

39.4

-1.2

2.9

52.3

44.3

Minor BPS

0.36

1.7

75.2

41.1

Associated Gene:

Gene:

HIVEP1

Ensembl Gene ID:

ENSAPLG00000012713

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029698

63896637 - 64010475

113839

ENSAPLT00000029632

63896637 - 64010475

113839