Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_64026699_64026787_F

Intron Information:

Intron Rank:

124009

Intron Class:

major

Intron Phase:

Intron Coordinates:

64026699 - 64026787

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTACATTCT

5'SS Class:

major

3'SS Sequence:

GTTTCTGGAGCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATAAG

U12 Branch Point Sequence:

TGTTTCTGGAGC

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

74.9

35.9

Major BPS

48.9

-0

1.5

56.1

37.3

Major PPT

66.3

0.37

1.1

62.5

43.1

Minor 5ss

41.1

-1

3.1

59.5

44.9

Minor BPS

52.1

0.05

1.8

66.71

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000016849

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046649

64025957 - 64028561

2605