Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_64079963_64086979_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64079963 - 64086979

Intron Length:

7017

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

GTAATTACTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATGTAAT

U12 Branch Point Sequence:

TTTCCCTCATTA

Flanking Amino Acid:

QWKYLTVLNLVLQAVFYGVS

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.9

35.2

Major BPS

75.6

0.64

1.1

75.7

36.5

Major PPT

67.4

0.39

42.4

Minor 5ss

38.8

-1.3

2.9

45.4

43.9

Minor BPS

57.9

0.24

1.8

73.35

38.6

Associated Gene:

Gene:

ADTRP

Ensembl Gene ID:

ENSAPLG00000012899

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000035602

64079810 - 64104788

24979

ENSAPLT00000013428

64079810 - 64110912

31103