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Intron Name: Anas_platyrhynchos_platyrhynchos_2_64399876_64400102_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

5UTR

Intron Coordinates:

64399876 - 64400102

Intron Length:

227

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGC|GTGGGTCCC

5'SS Class:

weak_major

3'SS Sequence:

CTTGTGCCCGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGAAAC

U12 Branch Point Sequence:

GATGCGTGAAAC

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

53.2

0.08

1.4

47.6

43.2

Major BPS

45.9

-0.2

1.3

50.7

41.6

Major PPT

72.3

0.5

0.9

65.6

36.1

Minor 5ss

29.6

-2.3

31.5

35.2

Minor BPS

43.8

-0.4

2.2

54.78

42.5

Associated Gene:

Gene:

RPSA

Ensembl Gene ID:

ENSAPLG00000015724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023062

64399677 - 64403983

4307

ENSAPLT00000016418

64399677 - 64404397

4721