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Intron Name: Anas_platyrhynchos_platyrhynchos_2_64400937_64402312_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

64400937 - 64402312

Intron Length:

1376

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGGCA

5'SS Class:

strong_major

3'SS Sequence:

GTCTGTTTTGCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCACAT

U12 Branch Point Sequence:

TCCTGCTTCACA

Flanking Amino Acid:

SVISSRNTGQRAVLKFAAAT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.2

0.73

68.4

36.4

Major BPS

77.7

0.69

83.3

27.7

Major PPT

82.1

0.72

0.9

76.2

37.8

Minor 5ss

35.6

-1.6

3.5

47.4

48.2

Minor BPS

52.2

0.06

2.2

66.36

46.4

Associated Gene:

Gene:

RPSA

Ensembl Gene ID:

ENSAPLG00000015724

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000023062

64399677 - 64403983

4307

ENSAPLT00000016418

64399677 - 64404397

4721