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Intron Name: Anas_platyrhynchos_platyrhynchos_2_65082524_65083137_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65082524 - 65083137

Intron Length:

614

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTATGGTAC

5'SS Class:

major

3'SS Sequence:

TTTTCCCTCGTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TCTATAT

U12 Branch Point Sequence:

CTGTCTATATGC

Flanking Amino Acid:

NGDSSNGAIYVYHAIYLEEM

Intron Amino Acid Position:

461

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

64.5

Major BPS

66.7

0.41

1.1

63.2

42.8

Major PPT

81.8

0.71

0.7

77.8

Minor 5ss

43.3

-0.7

3.1

54.6

44.5

Minor BPS

43.9

-0.4

2.1

54.3

44.2

Associated Gene:

Gene:

UBP1

Ensembl Gene ID:

ENSAPLG00000001472

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001889

65081758 - 65115759

34002

ENSAPLT00000019938

65081758 - 65115759

34002