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Intron Name: Anas_platyrhynchos_platyrhynchos_2_65083925_65085011_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65083925 - 65085011

Intron Length:

1087

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCTAAA

5'SS Class:

major

3'SS Sequence:

TGTGTTTCTCCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTAAA

U12 Branch Point Sequence:

ATTTAGTAAAAT

Flanking Amino Acid:

TYTRLFSNFSGADLLKLTRE

Intron Amino Acid Position:

394

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.2

0.62

1.1

75.9

35.2

Major BPS

85.3

0.88

0.8

84.2

21.8

Major PPT

0.72

0.9

73.6

41.8

Minor 5ss

46.7

-0.3

2.3

59.5

45.1

Minor BPS

45.7

-0.2

2.5

72.66

43.8

Associated Gene:

Gene:

UBP1

Ensembl Gene ID:

ENSAPLG00000001472

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019938

65081758 - 65115759

34002

ENSAPLT00000001889

65081758 - 65115759

34002