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Intron Name: Anas_platyrhynchos_platyrhynchos_2_65085385_65086131_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65085385 - 65086131

Intron Length:

747

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTCAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

CTGTCCTCTGTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAT

U12 Branch Point Sequence:

TTTATCTTAATA

Flanking Amino Acid:

AQHNTYSVPDSNSSSPNHQG

Intron Amino Acid Position:

344

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

1.2

82.3

32.2

Major BPS

0.92

0.9

86.2

29.1

Major PPT

75.2

0.57

0.8

30.9

Minor 5ss

40.2

-1.1

2.8

44.1

Minor BPS

78.8

0.9

1.1

83.66

30.1

Associated Gene:

Gene:

UBP1

Ensembl Gene ID:

ENSAPLG00000001472

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019938

65081758 - 65115759

34002

ENSAPLT00000001889

65081758 - 65115759

34002