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Intron Name: Anas_platyrhynchos_platyrhynchos_2_65093310_65093847_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65093310 - 65093847

Intron Length:

538

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAACAAAA

5'SS Class:

major

3'SS Sequence:

GGTGTTTGTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTATAAT

U12 Branch Point Sequence:

TTGACCCAAATC

Flanking Amino Acid:

PSYDTTILTEMRLEPIIEDA

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.3

0.69

1.1

76.9

33.7

Major BPS

70.1

0.5

1.3

72.3

40.4

Major PPT

70.5

0.46

1.1

61.5

48.6

Minor 5ss

38.3

-1.3

2.9

48.8

46.9

Minor BPS

48.5

-0.1

63.64

42.2

Associated Gene:

Gene:

UBP1

Ensembl Gene ID:

ENSAPLG00000001472

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001889

65081758 - 65115759

34002