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Intron Name: Anas_platyrhynchos_platyrhynchos_2_65401643_65405706_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

65401643 - 65405706

Intron Length:

4064

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCTATTTC

5'SS Class:

weak_major

3'SS Sequence:

ATCAAATTGTTAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCTTTTTAATC

Flanking Amino Acid:

RINRYLPNSKRRRLTQWI*

Intron Amino Acid Position:

197

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

65.3

0.36

1.3

68.2

37.8

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

57.7

0.17

1.1

55.5

43.9

Minor 5ss

45.6

-0.5

2.7

61.6

43.2

Minor BPS

74.9

0.76

1.1

33.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000010017

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010450

65401616 - 65412226

10611