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Intron Name: Anas_platyrhynchos_platyrhynchos_2_65456587_65458122_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65456587 - 65458122

Intron Length:

1536

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTATT

5'SS Class:

major

3'SS Sequence:

AACGTATTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTAATTGAATA

Flanking Amino Acid:

HMLIQIRQWILCSEDIAVLY

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.7

0.68

1.1

84.2

33.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

71.3

0.48

66.5

43.4

Minor 5ss

44.6

-0.6

2.9

70.4

39.5

Minor BPS

55.6

0.17

1.6

70.08

35.9

Associated Gene:

Gene:

TRANK1

Ensembl Gene ID:

ENSAPLG00000010356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047877

65444577 - 65493084

48508

ENSAPLT00000045226

65444577 - 65491911

47335

ENSAPLT00000032043

65444577 - 65493084

48508

ENSAPLT00000021861

65444577 - 65493084

48508