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Intron Name: Anas_platyrhynchos_platyrhynchos_2_65465521_65467445_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65465521 - 65467445

Intron Length:

1925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAATACC

5'SS Class:

major

3'SS Sequence:

CTTTTAATTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTCCTTTTAATT

Flanking Amino Acid:

ASSSEYSRKHSQTEDVLMLL

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

67.7

0.42

1.1

66.2

37.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

80.8

0.69

0.8

78.9

33.2

Minor 5ss

38.5

-1.3

2.8

52.3

38.2

Minor BPS

70.4

0.72

1.2

80.3

36.2

Associated Gene:

Gene:

TRANK1

Ensembl Gene ID:

ENSAPLG00000010356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032043

65444577 - 65493084

48508

ENSAPLT00000021861

65444577 - 65493084

48508

ENSAPLT00000010785

65444577 - 65493084

48508

ENSAPLT00000047877

65444577 - 65493084

48508

ENSAPLT00000045226

65444577 - 65491911

47335