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Intron Name: Anas_platyrhynchos_platyrhynchos_2_65476639_65477190_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65476639 - 65477190

Intron Length:

552

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGAGTAA

5'SS Class:

major

3'SS Sequence:

CTGCTTGTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTAAAA

U12 Branch Point Sequence:

TGAAGTTTAAAA

Flanking Amino Acid:

QLYQNYRSHSGILRLASGVV

Intron Amino Acid Position:

1461

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.5

0.51

1.1

65.2

37.1

Major BPS

73.1

0.58

79.6

29.1

Major PPT

73.7

0.53

0.9

68.8

37.1

Minor 5ss

-1.8

3.6

45.7

49.5

Minor BPS

48.5

-0.1

1.9

59.13

40.1

Associated Gene:

Gene:

TRANK1

Ensembl Gene ID:

ENSAPLG00000010356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045226

65444577 - 65491911

47335

ENSAPLT00000032043

65444577 - 65493084

48508

ENSAPLT00000021861

65444577 - 65493084

48508

ENSAPLT00000010785

65444577 - 65493084

48508

ENSAPLT00000047877

65444577 - 65493084

48508