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Intron Name: Anas_platyrhynchos_platyrhynchos_2_65477391_65477776_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65477391 - 65477776

Intron Length:

386

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGGTTT

5'SS Class:

major

3'SS Sequence:

TATTTTATGTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

CTTTTATTAATA

Flanking Amino Acid:

TQPIEFGAHQVILVANETAK

Intron Amino Acid Position:

1528

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.4

0.53

1.2

73.3

37.9

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

73.9

0.54

74.9

39.5

Minor 5ss

45.1

-0.5

3.1

64.8

46.5

Minor BPS

67.3

0.54

1.6

75.76

35.9

Associated Gene:

Gene:

TRANK1

Ensembl Gene ID:

ENSAPLG00000010356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047877

65444577 - 65493084

48508

ENSAPLT00000045226

65444577 - 65491911

47335

ENSAPLT00000021861

65444577 - 65493084

48508

ENSAPLT00000010785

65444577 - 65493084

48508