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Intron Name: Anas_platyrhynchos_platyrhynchos_2_65490502_65491674_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

65490502 - 65491674

Intron Length:

1173

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGATTT

5'SS Class:

strong_major

3'SS Sequence:

TGCTTCATTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GCTTCAT

U12 Branch Point Sequence:

TTTGCTTCATTT

Flanking Amino Acid:

EIYERKAWAEAEEIITKRAN

Intron Amino Acid Position:

2856

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

81.6

33.2

Major BPS

69.6

0.49

1.3

73.6

41.8

Major PPT

80.8

0.69

0.9

77.8

35.2

Minor 5ss

42.5

-0.8

3.4

64.3

47.2

Minor BPS

52.2

0.15

1.9

75.55

42.1

Associated Gene:

Gene:

TRANK1

Ensembl Gene ID:

ENSAPLG00000010356

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045226

65444577 - 65491911

47335

ENSAPLT00000032043

65444577 - 65493084

48508

ENSAPLT00000021861

65444577 - 65493084

48508

ENSAPLT00000010785

65444577 - 65493084

48508

ENSAPLT00000047877

65444577 - 65493084

48508