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Intron Name: Anas_platyrhynchos_platyrhynchos_2_65584222_65589343_F

Intron Information:

Intron Rank:

142568

Intron Class:

major

Intron Phase:

Intron Coordinates:

65584222 - 65589343

Intron Length:

5122

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

TTGTCCCTTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GAAAAAT

U12 Branch Point Sequence:

GGTACTTGGAAA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

38.4

Major BPS

-0.1

1.2

53.6

38.7

Major PPT

82.5

0.73

0.8

73.9

36.8

Minor 5ss

-2.3

2.9

32.9

41.9

Minor BPS

46.6

-0.2

1.6

54.74

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040978

65560562 - 65596894

36333