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Intron Name: Anas_platyrhynchos_platyrhynchos_2_65584222_65628748_F

Intron Information:

Intron Rank:

142574

Intron Class:

major

Intron Phase:

Intron Coordinates:

65584222 - 65628748

Intron Length:

44527

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTCAT

5'SS Class:

strong_major

3'SS Sequence:

CTGTTTGTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GTGTAAT

U12 Branch Point Sequence:

TTGTGTGTAATT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

38.4

Major BPS

66.7

0.41

1.4

69.7

44.2

Major PPT

78.2

0.64

0.9

76.9

37.3

Minor 5ss

-2.3

2.9

32.9

41.9

Minor BPS

49.2

0.02

2.3

74.76

43.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000026830

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000046456

65582119 - 65628865

46747