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Intron Name: Anas_platyrhynchos_platyrhynchos_2_6638754_6642785_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6638754 - 6642785

Intron Length:

4032

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

GTCCCTTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAG

U12 Branch Point Sequence:

AGCTTGTTAACT

Flanking Amino Acid:

KGEVDFSPEMGMIFNEEDQE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.8

35.5

Major BPS

75.6

0.64

1.5

34.5

Major PPT

78.7

0.65

0.8

72.7

Minor 5ss

34.9

-1.7

3.2

42.4

44.3

Minor BPS

57.8

0.32

2.1

74.4

42.5

Associated Gene:

Gene:

GALNT11

Ensembl Gene ID:

ENSAPLG00000003570

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003640

6638421 - 6666758

28338