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Intron Name: Anas_platyrhynchos_platyrhynchos_2_6670979_6671231_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

6670979 - 6671231

Intron Length:

253

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAGGGCTG

5'SS Class:

major

3'SS Sequence:

CATCTTTTTCCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATCAA

U12 Branch Point Sequence:

TTTTTGGTAACC

Flanking Amino Acid:

SSRRIQKGEELCYDYKFDFE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

1.1

64.3

47.1

Major BPS

62.4

0.31

32.1

Major PPT

84.5

0.78

0.8

76.5

37.2

Minor 5ss

-1.9

3.6

46.2

49.1

Minor BPS

0.04

2.6

77.35

39.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003825

6670886 - 6711806

40921