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Intron Name: Anas_platyrhynchos_platyrhynchos_2_6674495_6675481_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6674495 - 6675481

Intron Length:

987

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATTTT

5'SS Class:

strong_major

3'SS Sequence:

TATGGTTGTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ATCCATGTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.8

90.3

22.3

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

67.4

0.39

62.1

44.1

Minor 5ss

45.5

-0.5

66.9

44.4

Minor BPS

45.9

-0.2

2.1

64.24

40.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003825

6670886 - 6711806

40921