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Intron Name: Anas_platyrhynchos_platyrhynchos_2_66929581_66929993_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66929581 - 66929993

Intron Length:

413

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAAGTGCT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTGTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTCTCAT

U12 Branch Point Sequence:

TTCTAGCCAAAG

Flanking Amino Acid:

GVYDIPPAKGIYAIPPSACR

Intron Amino Acid Position:

217

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

78.8

35.5

Major BPS

77.2

0.67

1.2

79.6

35.6

Major PPT

86.2

0.81

0.8

84.1

30.8

Minor 5ss

34.9

-1.7

3.2

42.4

44.3

Minor BPS

36.2

-1.1

2.4

46.76

45.4

Associated Gene:

Gene:

NEDD9

Ensembl Gene ID:

ENSAPLG00000001295

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000001333

66866025 - 66934276

68252