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Intron Name: Anas_platyrhynchos_platyrhynchos_2_66950069_66959671_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

66950069 - 66959671

Intron Length:

9603

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCG|GTGAGTGGC

5'SS Class:

strong_major

3'SS Sequence:

TTGTCTCCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AATTAAC

U12 Branch Point Sequence:

AATTAACTAAGT

Flanking Amino Acid:

LACVLLFMLCGWYVVWQLFL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.7

0.72

Major BPS

73.1

0.57

0.9

73.7

27.1

Major PPT

83.1

0.75

0.8

77.8

Minor 5ss

28.1

-2.5

3.1

35.3

41.4

Minor BPS

44.3

-0.3

2.2

67.14

42.6

Associated Gene:

Gene:

SMIM13

Ensembl Gene ID:

ENSAPLG00000023021

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000037592

66949875 - 66959747

9873