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Intron Name: Anas_platyrhynchos_platyrhynchos_2_6696462_6697507_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6696462 - 6697507

Intron Length:

1046

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTGGG

5'SS Class:

major

3'SS Sequence:

CTTTCTTTCGTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

AGCTTTGTAATT

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.3

0.64

61.5

43.2

Major BPS

84.4

0.85

1.1

34.5

Major PPT

83.5

0.75

0.7

80.4

24.8

Minor 5ss

38.3

-1.3

3.1

45.9

44.6

Minor BPS

49.1

0.01

65.71

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003825

6670886 - 6711806

40921