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Intron Name: Anas_platyrhynchos_platyrhynchos_2_67010487_67012528_F


Intron Information:

Intron Rank:
4

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
67010487 - 67012528

Intron Length:
2042

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAA|GTAAGTCTC

5'SS Class:
strong_major

3'SS Sequence:
TGAATGTTCATAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
ATATAAA

U12 Branch Point Sequence:
TCTGTGTTGAAT

Flanking Amino Acid:
CVLNWIPCGQSFFGPTLNSF

Intron Amino Acid Position:
152

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
85.6
0.84
0.9
79
35.3

Major BPS
69.8
0.49
1
70.3
31.8

Major PPT
64
0.31
1
57.3
43

Minor 5ss
40.5
-1.1
3
54
37

Minor BPS
46.2
-0.2
2.2
66.96
44.3

Associated Gene:

Gene:
ELOVL2

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

66968656 - 67013430
44775

66990890 - 67014725
23836