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Intron Name: Anas_platyrhynchos_platyrhynchos_2_67071053_67073199_F


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
67071053 - 67073199

Intron Length:
2147

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
ACG|GTATGTAAC

5'SS Class:
strong_major

3'SS Sequence:
GACCTTATTTCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TACTCAC

U12 Branch Point Sequence:
TTTTCTCTGACC

Flanking Amino Acid:
NESGELVAIKRMKRKFYSWD

Intron Amino Acid Position:
34

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
80
0.71
1
74.4
35.9

Major BPS
77.2
0.68
0.8
77.6
26.2

Major PPT
73.8
0.54
0.9
69.9
39.9

Minor 5ss
42.6
-0.8
2.6
54.6
42.8

Minor BPS
69.6
0.6
1.6
82.6
30.8

Associated Gene:

Gene:
MAK

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

67070952 - 67135667
64716

67070952 - 67096011
25060