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Intron Name: Anas_platyrhynchos_platyrhynchos_2_67077465_67082183_F


Intron Information:

Intron Rank:
6

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
67077465 - 67082183

Intron Length:
4719

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTAAGACTT

5'SS Class:
strong_major

3'SS Sequence:
TCCTTTTAAACAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TGTTTAT

U12 Branch Point Sequence:
TTCCTTTTAAAC

Flanking Amino Acid:
ICQVLGTPKKSDWPEGYHLA

Intron Amino Acid Position:
222

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
92.3
1
0.8
84.6
33.3

Major BPS
81.3
0.78
1.1
71.7
44.6

Major PPT
75.6
0.58
0.9
73.1
35.1

Minor 5ss
37.9
-1.4
3.3
56.5
47.6

Minor BPS
62
0.35
1.4
68.31
37.2

Associated Gene:

Gene:
MAK

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

67070952 - 67135667
64716

67070952 - 67096011
25060