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Intron Name: Anas_platyrhynchos_platyrhynchos_2_67082352_67083557_F


Intron Information:

Intron Rank:
7

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
67082352 - 67083557

Intron Length:
1206

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTCTGAGCT

5'SS Class:
major

3'SS Sequence:
TCTTCTTCTCCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
ATTTTAT

U12 Branch Point Sequence:
TTAAGTATAATT

Flanking Amino Acid:
NPKKRPTASQALKYPYFQVG

Intron Amino Acid Position:
278

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.5
0.44
1.3
65.2
39.1

Major BPS
87.7
0.94
0.8
77.7
36.7

Major PPT
88.2
0.86
0.7
80.8
31.2

Minor 5ss
34.6
-1.8
3.3
48.7
47

Minor BPS
48.1
-0
2
70.32
40.9

Associated Gene:

Gene:
MAK

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

67070952 - 67096011
25060

67070952 - 67135667
64716