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Intron Name: Anas_platyrhynchos_platyrhynchos_2_67085013_67085549_F


Intron Information:

Intron Rank:
9

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
67085013 - 67085549

Intron Length:
537

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TAG|GTAAGTCCT

5'SS Class:
strong_major

3'SS Sequence:
TTTGATTTTTCAG|C

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
TTTTGAT

U12 Branch Point Sequence:
AATGTTTTGATT

Flanking Amino Acid:
KENKNKECLFSIPEPNASCC

Intron Amino Acid Position:
448

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
95.3
1.07
0.7
84.4
33.5

Major BPS
96.4
1.15
0.6
85.7
34.9

Major PPT
87.3
0.84
0.8
84.8
35.4

Minor 5ss
36.9
-1.5
3
51.2
45.2

Minor BPS
56.4
0.28
1.3
68.66
36.8

Associated Gene:

Gene:
MAK

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

67070952 - 67135667
64716

67070952 - 67096011
25060