Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_67092380_67095859_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

67092380 - 67095859

Intron Length:

3480

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGAAAC

5'SS Class:

strong_major

3'SS Sequence:

TGGTTTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAT

U12 Branch Point Sequence:

ACTTTTTTGATT

Flanking Amino Acid:

QLAPLGPSVSDYSWKNKAAR

Intron Amino Acid Position:

604

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

92.4

0.8

84.2

26.4

Major BPS

96.4

1.15

0.6

85.7

34.9

Major PPT

83.7

0.76

0.9

81.2

36.5

Minor 5ss

33.8

-1.8

2.9

42.8

44.4

Minor BPS

66.5

0.6

1.1

75.74

35.5

Associated Gene:

Gene:

MAK

Ensembl Gene ID:

ENSAPLG00000003041

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003108

67070952 - 67096011

25060

ENSAPLT00000025948

67070952 - 67135667

64716