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Intron Name: Anas_platyrhynchos_platyrhynchos_2_6710131_6711701_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

6710131 - 6711701

Intron Length:

1571

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGTAAG

5'SS Class:

strong_major

3'SS Sequence:

TTTCCTCCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATTTAAT

U12 Branch Point Sequence:

TCTAATTTAATA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

79.7

35.4

Major BPS

90.7

1.01

0.7

19.9

Major PPT

87.5

0.84

0.6

85.4

21.9

Minor 5ss

41.2

-1

2.5

50.1

46.4

Minor BPS

61.1

0.35

1.5

68.67

38.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000003614

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003825

6670886 - 6711806

40921