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Intron Name: Anas_platyrhynchos_platyrhynchos_2_67144714_67149295_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

67144714 - 67149295

Intron Length:

4582

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCGCT

5'SS Class:

strong_major

3'SS Sequence:

CCCCACACCCTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

CCCATTTTGACA

Flanking Amino Acid:

TDNIKYEECEERHDSTSNGT

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

89.7

0.94

0.9

78.8

35.5

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

56.8

0.15

0.8

29.1

Minor 5ss

-1.2

3.4

56.7

47.6

Minor BPS

50.3

1.3

53.37

39.8

Associated Gene:

Gene:

TFAP2A

Ensembl Gene ID:

ENSAPLG00000003330

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042607

67144663 - 67159257

14595